PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr6P28760_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 136aa    MW: 14927 Da    PI: 9.6578
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr6P28760_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.70.0002439741454
                           HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                           d+i ++ ++L++l+ +      +K + a++L +A+ YIk L
  GSMUA_Achr6P28760_001 39 DKIGERVSKLQQLVSPF-----GKSDTASVLSEATAYIKFL 74
                           57778888999999998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.3692574IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-102689IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-73584IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.42E-53679No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MMMTEVVDHK RRGHDGFVLG NLSGEKRLKA AIGVQEKKDK IGERVSKLQQ LVSPFGKSDT  60
ASVLSEATAY IKFLHDQLQV LSAPYLQTTV TGEMEDGEHH SLRSRGLCLV PVASTRRIAQ  120
SNGADLWAPV NSNRSP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009406443.11e-95PREDICTED: transcription factor bHLH113-like
SwissprotQ9LT671e-33BH113_ARATH; Transcription factor bHLH113
TrEMBLM0TB213e-98M0TB21_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P28760_0017e-98(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5272812
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.53e-45bHLH family protein